PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010524574.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
Family CAMTA
Protein Properties Length: 924aa    MW: 104161 Da    PI: 6.935
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010524574.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1163.43.9e-51291462118
            CG-1   2 lke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfq 95 
                     l+e k rwl+++ei+a+L n++ + +  ++ + pksg+++L++rk++r+frkDG++wkkkkdgktv+E+he+LKvg+ e +++yYah+e+nptf 
  XP_010524574.1  29 LEEaKGRWLRPNEIHAVLCNHKYFCINVKPMNLPKSGTIVLFDRKMLRNFRKDGHNWKKKKDGKTVKEAHEHLKVGNEERIHVYYAHGEDNPTFV 123
                     455599***************************************************************************************** PP

            CG-1  96 rrcywlLeeelekivlvhylevk 118
                     rrcywlL+++le+ivlvhy+e++
  XP_010524574.1 124 RRCYWLLDKTLEHIVLVHYRETQ 146
                     ********************986 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143779.40225151IPR005559CG-1 DNA-binding domain
SMARTSM010765.1E-7628146IPR005559CG-1 DNA-binding domain
PfamPF038593.2E-4631144IPR005559CG-1 DNA-binding domain
SuperFamilySSF812961.68E-11370454IPR014756Immunoglobulin E-set
CDDcd002044.90E-16555665No hitNo description
Gene3DG3DSA:1.25.40.202.4E-17556668IPR020683Ankyrin repeat-containing domain
SuperFamilySSF484032.95E-18557674IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5029715.486564665IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5008811.301606638IPR002110Ankyrin repeat
SMARTSM002482.0E-5606635IPR002110Ankyrin repeat
PfamPF136371.5E-5608653No hitNo description
SuperFamilySSF525403.19E-7715820IPR027417P-loop containing nucleoside triphosphate hydrolase
PROSITE profilePS500967.181754780IPR000048IQ motif, EF-hand binding site
SMARTSM00015230769791IPR000048IQ motif, EF-hand binding site
SMARTSM000150.002792814IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500969.871793817IPR000048IQ motif, EF-hand binding site
PfamPF006120.0015795814IPR000048IQ motif, EF-hand binding site
SMARTSM0001511870892IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500968.334871900IPR000048IQ motif, EF-hand binding site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 924 aa     Download sequence    Send to blast
MDGAGSGRLV GSDIHGFHTL QDLDVPTMLE EAKGRWLRPN EIHAVLCNHK YFCINVKPMN  60
LPKSGTIVLF DRKMLRNFRK DGHNWKKKKD GKTVKEAHEH LKVGNEERIH VYYAHGEDNP  120
TFVRRCYWLL DKTLEHIVLV HYRETQEVQT SPATPGNTSS ISDHSSPTCV AGDIDSGVGN  180
ARYVAERNDP IAQNHEIRLH EINTLEWDEL LVPNDDNSPP APTVDDMSYL TQTLQNAANG  240
SAKNGNHLAS YNASTDVQSF PCLGEPSYQN NNLCDPGRFS SQQVHCGVDP GLQNRDPSAA  300
VAGESVDALL NNGLQSQESF GRWMNAFISD SPGSVDDPSH ESTLSPGQDS LTSPAAYHHQ  360
SNMPEQIFSI TDVSPAWAFS TEKTKILVTG FFHDGYQHQA RSNLFCICGE TCVPAEIIQV  420
GVYRCFLPPQ SPAIVNLYLS DDGQKPISQF FSFECRSAAV PEKSITQDNV SSRWEEFEFQ  480
VRLAHLLFTS SNKVNILSSE VSAGSIQEAK KFVNKTSHLL NSWAYLVKSV QGNQLSFEQA  540
KDNLFELTLK NRLKEWLLEK VLEGGKITEY DSKGLGVIHL CAILGYTWSI HLFSWSGLSL  600
NFRDKLGWTA LHWAAYYGRE KMVAALLSAG ARPNLVTDPT KKNVDGCTAA DLAQQKGYDG  660
LAAYLSEKCL VAQFKDMKIA GNISGNLETC KAEASNPGTL TEEEQSLKDT LTAYRTAAEA  720
ASRIQVAFRE HALNVRSKAV QFGSREEEAQ SIIAAMKIQH AFRNHDTRKK MAAAVRIQYR  780
FHTWKMRREF LNMRRQVIKI QAAFRGFQVR RQYRKIVWSV GVLEKAILRW RLKRKGFRGM  840
QVSAITINED EGETEEEDFY KTSQRQAEDR LERSVVRVQA MFRSKKAQQD YRRMKLAHEE  900
AQLEYDGLQE LDDDDDDTSR AMER
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00435DAPTransfer from AT4G16150Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010524574.10.0PREDICTED: calmodulin-binding transcription activator 5-like isoform X1
SwissprotO234630.0CMTA5_ARATH; Calmodulin-binding transcription activator 5
TrEMBLR0GWD20.0R0GWD2_9BRAS; Uncharacterized protein
STRINGAT4G16150.10.0(Arabidopsis thaliana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM40212758
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16150.10.0calmodulin binding;transcription regulators